web-based interactive decision tree tool intervax-tool Search Results


web-based graphical user interface  (RStudio)
90
RStudio web-based graphical user interface
Web Based Graphical User Interface, supplied by RStudio, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/web-based graphical user interface/product/RStudio
Average 90 stars, based on 1 article reviews
web-based graphical user interface - by Bioz Stars, 2026-05
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web-based interactive decision tree tool intervax-tool  (Intervax Ltd)
90
Intervax Ltd web-based interactive decision tree tool intervax-tool
Screenshot of <t>InterVax-Tool</t> at http://vaxeval.com . The <t>decision</t> <t>tree</t> with decisions and notes is presented on the top portion. The lower portion provides content on how relevant key considerations impact the active decision in the tree and provides the opportunity for users to take notes on each key consideration, building a description of the scenario during the process.
Web Based Interactive Decision Tree Tool Intervax Tool, supplied by Intervax Ltd, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/web-based interactive decision tree tool intervax-tool/product/Intervax Ltd
Average 90 stars, based on 1 article reviews
web-based interactive decision tree tool intervax-tool - by Bioz Stars, 2026-05
90/100 stars
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primer3 core c program version 2.3.4  (SourceForge net)
90
SourceForge net primer3 core c program version 2.3.4
(A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by <t>Primer3</t> with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.
Primer3 Core C Program Version 2.3.4, supplied by SourceForge net, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/primer3 core c program version 2.3.4/product/SourceForge net
Average 90 stars, based on 1 article reviews
primer3 core c program version 2.3.4 - by Bioz Stars, 2026-05
90/100 stars
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epimatrix t-cell epitope prediction software  (EpiVax Inc)
90
EpiVax Inc epimatrix t-cell epitope prediction software
(A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by <t>Primer3</t> with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.
Epimatrix T Cell Epitope Prediction Software, supplied by EpiVax Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/epimatrix t-cell epitope prediction software/product/EpiVax Inc
Average 90 stars, based on 1 article reviews
epimatrix t-cell epitope prediction software - by Bioz Stars, 2026-05
90/100 stars
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gapfilling tool  (DOE Systems Biology Knowledgebase)
90
DOE Systems Biology Knowledgebase gapfilling tool
(A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by <t>Primer3</t> with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.
Gapfilling Tool, supplied by DOE Systems Biology Knowledgebase, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/gapfilling tool/product/DOE Systems Biology Knowledgebase
Average 90 stars, based on 1 article reviews
gapfilling tool - by Bioz Stars, 2026-05
90/100 stars
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distributed terminology service  (Apelon Inc)
90
Apelon Inc distributed terminology service
(A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by <t>Primer3</t> with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.
Distributed Terminology Service, supplied by Apelon Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/distributed terminology service/product/Apelon Inc
Average 90 stars, based on 1 article reviews
distributed terminology service - by Bioz Stars, 2026-05
90/100 stars
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web-based command line interface  (DOE Systems Biology Knowledgebase)
90
DOE Systems Biology Knowledgebase web-based command line interface
(A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by <t>Primer3</t> with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.
Web Based Command Line Interface, supplied by DOE Systems Biology Knowledgebase, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/web-based command line interface/product/DOE Systems Biology Knowledgebase
Average 90 stars, based on 1 article reviews
web-based command line interface - by Bioz Stars, 2026-05
90/100 stars
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dockingserver  (AUTODOCK GmbH)
90
AUTODOCK GmbH dockingserver
Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by <t>DockingServer.</t> (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.
Dockingserver, supplied by AUTODOCK GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/dockingserver/product/AUTODOCK GmbH
Average 90 stars, based on 1 article reviews
dockingserver - by Bioz Stars, 2026-05
90/100 stars
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idns web-based software  (SmartGene GmbH)
90
SmartGene GmbH idns web-based software
Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by <t>DockingServer.</t> (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.
Idns Web Based Software, supplied by SmartGene GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/idns web-based software/product/SmartGene GmbH
Average 90 stars, based on 1 article reviews
idns web-based software - by Bioz Stars, 2026-05
90/100 stars
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free and open source software  (FOSS GmbH)
90
FOSS GmbH free and open source software
Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by <t>DockingServer.</t> (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.
Free And Open Source Software, supplied by FOSS GmbH, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/free and open source software/product/FOSS GmbH
Average 90 stars, based on 1 article reviews
free and open source software - by Bioz Stars, 2026-05
90/100 stars
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software platform eip  (Xerox Corporation)
90
Xerox Corporation software platform eip
Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by <t>DockingServer.</t> (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.
Software Platform Eip, supplied by Xerox Corporation, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/software platform eip/product/Xerox Corporation
Average 90 stars, based on 1 article reviews
software platform eip - by Bioz Stars, 2026-05
90/100 stars
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livedata web-based software  (Netsens s r l)
90
Netsens s r l livedata web-based software
Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by <t>DockingServer.</t> (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.
Livedata Web Based Software, supplied by Netsens s r l, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
https://www.bioz.com/result/livedata web-based software/product/Netsens s r l
Average 90 stars, based on 1 article reviews
livedata web-based software - by Bioz Stars, 2026-05
90/100 stars
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Image Search Results


Screenshot of InterVax-Tool at http://vaxeval.com . The decision tree with decisions and notes is presented on the top portion. The lower portion provides content on how relevant key considerations impact the active decision in the tree and provides the opportunity for users to take notes on each key consideration, building a description of the scenario during the process.

Journal: Vaccine

Article Title: An online decision tree for vaccine efficacy trial design during infectious disease epidemics: The InterVax-Tool

doi: 10.1016/j.vaccine.2019.06.019

Figure Lengend Snippet: Screenshot of InterVax-Tool at http://vaxeval.com . The decision tree with decisions and notes is presented on the top portion. The lower portion provides content on how relevant key considerations impact the active decision in the tree and provides the opportunity for users to take notes on each key consideration, building a description of the scenario during the process.

Article Snippet: We created a web-based interactive decision tree tool, InterVax-Tool, to support decision making on vaccine trial design.

Techniques:

(A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by Primer3 with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.

Journal: PLoS ONE

Article Title: Edesign: Primer and Enhanced Internal Probe Design Tool for Quantitative PCR Experiments and Genotyping Assays

doi: 10.1371/journal.pone.0146950

Figure Lengend Snippet: (A-D) Evaluation for mutation detection using pandemic 2009 H1N1 influenza virus genome segment 6 (neuraminidase) H275Y mutation; (E-H) Evaluation for low copy DNA detection using influenza B virus genome segment 7 (matrix protein) as a template. Upper panels (A, C, E, G) show results obtained by using Eprobes and primers designed by Primer3 with updated tables for T M calculation of ECHOs. Lower panels (B, D, F, H) show results obtained by using Eprobes and primers designed by Edesign. Details on primers and Eprobes used are provided in and Figs.

Article Snippet: Edesign is based on the Primer3 software (Primer3 core C program version 2.3.4 and Primer3 web interface version 3.0.0), for which the source code was downloaded at http://sourceforge.net/projects/primer3/files/primer3/ , and for the web interface at http://sourceforge.net/projects/primer3/files/primer3-web/ .

Techniques: Mutagenesis, Virus

Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by DockingServer. (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.

Journal: In Silico Pharmacology

Article Title: Inhibition of VEGF: a novel mechanism to control angiogenesis by Withania somnifera ’s key metabolite Withaferin A

doi: 10.1186/2193-9616-1-11

Figure Lengend Snippet: Visualization of Withaferin A/Bevacizumab-VEGF protein interaction profile by DockingServer. (A) Visualization of Withaferin A-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Withaferin A: ball and stick, carbon colour: green. (B) Visualization of Bevacizumab-VEGF interaction by DockingServer. Representation of VEGF: cartoon, colour: silver; representation of interacting side chain: cylinder, carbon colour: blue; representation of Bevacizumab: ball and stick, carbon colour: green. (C) Surface visualization of Withaferin A-VEGF interaction by DockingServer.Withaferin A is indicated as red surface and interacting side chain of VEGF is indicated as blue surface. (D) Surface visualization of Bevacizumab-VEGF interaction by DockingServer. Bevacizumab is indicated as red surface and interacting side chain of VEGF is indicated as blue surface.

Article Snippet: DockingServer is a web-based interface to handle all aspects of molecular docking using AutoDock tools.

Techniques:

2D plot of Withaferin A/Bevacizumab-VEGF protein interaction profile by DockingServer. (A) 2D plot of Withaferin A-VEGF interaction by DockingServer. Ligand bond, non-ligand bond, hydrogen bond and its length are mentioned. (B) 2D plot of Bevacizumab-VEGF interaction by DockingServer. Ligand bond, non-ligand bond, hydrogen bond and its length are mentioned.

Journal: In Silico Pharmacology

Article Title: Inhibition of VEGF: a novel mechanism to control angiogenesis by Withania somnifera ’s key metabolite Withaferin A

doi: 10.1186/2193-9616-1-11

Figure Lengend Snippet: 2D plot of Withaferin A/Bevacizumab-VEGF protein interaction profile by DockingServer. (A) 2D plot of Withaferin A-VEGF interaction by DockingServer. Ligand bond, non-ligand bond, hydrogen bond and its length are mentioned. (B) 2D plot of Bevacizumab-VEGF interaction by DockingServer. Ligand bond, non-ligand bond, hydrogen bond and its length are mentioned.

Article Snippet: DockingServer is a web-based interface to handle all aspects of molecular docking using AutoDock tools.

Techniques:

HB plot of Withaferin A/Bevacizumab-VEGF protein interaction profile by DockingServer. (A) HB plot structure of Withaferin A-VEGF interaction by DockingServer. Interactions with amino acids: 29: Ile, 31: Thr, 32: Leu, 50: Ser, 51: Cys, 60: Cys, 61: Cys, 64: Glu, 67: Glu, and 107: Cys. (B) HB Plot structure of Bevacizumab-VEGF interaction by DockingServer. Interactions with amino acids: 34: Asp, 36: Phe, 47: Phe, 50: Ser, and 64: Glu.

Journal: In Silico Pharmacology

Article Title: Inhibition of VEGF: a novel mechanism to control angiogenesis by Withania somnifera ’s key metabolite Withaferin A

doi: 10.1186/2193-9616-1-11

Figure Lengend Snippet: HB plot of Withaferin A/Bevacizumab-VEGF protein interaction profile by DockingServer. (A) HB plot structure of Withaferin A-VEGF interaction by DockingServer. Interactions with amino acids: 29: Ile, 31: Thr, 32: Leu, 50: Ser, 51: Cys, 60: Cys, 61: Cys, 64: Glu, 67: Glu, and 107: Cys. (B) HB Plot structure of Bevacizumab-VEGF interaction by DockingServer. Interactions with amino acids: 34: Asp, 36: Phe, 47: Phe, 50: Ser, and 64: Glu.

Article Snippet: DockingServer is a web-based interface to handle all aspects of molecular docking using AutoDock tools.

Techniques: